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Home » Recipes » Muffins » Dark Chocolate Cherry Muffins

Dark Chocolate Cherry Muffins

Published: Aug 10, 2020 · Modified: Jul 21, 2021 · by Kyleigh Sage · This post may contain affiliate links.

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Chocolate and cherry is one of my favorite flavor combos! These dark chocolate cherry muffins are filled with dark chocolate chips and fresh cherries!

An ongoing debate in our house is about the difference between muffins and cupcakes. Kyle insists that since my muffins aren't "healthy" they are actually cupcakes. To which my response is that cupcakes are frosted and they don't have things mixed into the batter. But whatever you call them, these chocolate cherry muffins are delish!

chocolate cherry muffins in muffin tin

If you love cherry season as much as I do, be sure to check out the rest of our fresh cherry recipes! You might also like these cranberry orange muffins!

Jump to:
  • Ingredient Notes
  • How to Make Muffins
  • Tips for the Best Baked Goods
  • Recipe FAQ's
  • Tips for Success!
  • More Recipes You Might Like
  • Recipe Card
  • Comments

Ingredient Notes

You just need a few simple ingredients to make these dark chocolate cherry muffins!

labeled shot of dark chocolate cherry muffins ingredients

Cherries - Use fresh, ripe cherries for the best flavor! I do NOT recommend substituting with frozen cherries. I highly recommend using a cherry pitter to remove the pits.

Dark Chocolate Chips - If you like dark chocolate, I highly recommend the Ghirardelli bittersweet chocolate baking chips. The flavor is amazing and the baking chips are slightly larger and flatter than normal chocolate chips and melt beautifully inside your cookies.

Almond Extract - I love how almond extract compliments the flavor of the cherries! But you can leave it out if preferred.

The complete list of ingredients and amounts is located in the recipe card below.

How to Make Muffins

In a large bowl, whisk together all of the dry ingredients.

In a separate bowl, whisk together the butter and sugar. Add in the eggs, vanilla, and lemon zest and whisk until combined and smooth.

Add half of the dry ingredient mixture and stir until combined. Mix in the milk. Then stir in the remaining dry ingredients.

adding flour to wet ingredients for muffins
bowl of muffin batter

Gently fold in the dark chocolate chips and cherries.

muffin batter adding in chocolate chips and fresh cherries
muffin batter before baking

Spoon the batter into your muffin cups so that they are about ⅔ full.

Bake at 375°F for 20-25 minutes for regular sized muffins. Rotate the pan about halfway through so that the muffins brown evenly.

Remove from the oven and let cool on a wire rack.

final shot of dark chocolate cherry muffins

Note: While I photograph my chocolate cherry muffins in this cute rustic pan, I definitely do not bake in it! For all my muffins and cupcakes I use my USA Pan muffin pan. In fact, almost all of my baking pans are USA Pan because they are super high quality and durable. I highly recommend them!

Tips for the Best Baked Goods

Use room temperature ingredients! Always make sure ingredients like butter, eggs, milk, yogurt, etc. are at room temperature before baking (unless the recipe indicates otherwise)! This ensures they'll incorporate into the batter more easily and leads to overall better texture. Remove all ingredients from the fridge 30 minutes to an hour before baking for best results.

Measure your flour correctly! It's most accurate to use a kitchen scale, but if you're measuring by volume you want to spoon and level! Fluff up the flour a bit with a spoon, and then spoon flour into the measuring cup. Once it's overflowing, use the back of a knife to level it off. Don't ever pack flour into the measuring cup or you'll end up with way too much! Improperly measured flour can lead to dry, dense baked goods. [Measure cocoa powder the same way!]

Use an oven thermometer! Just because your oven says it's 350, doesn't mean it is! If you oven hasn't been calibrated recently, it can be as much as 30 degrees off, which will negatively affect all baked goods from cakes to macarons! An oven thermometer is the easiest/cheapest way to ensure your oven is always at the proper temperature.

Make sure you baking powder is fresh! Baking powder is important for helping baked goods rise properly, but it has a relatively short shelf life once opened, so it's one of the few items I never buy in bulk! To test if your baking powder is still fresh, add a small amount to boiling water. If it bubbles it's still good to use, but if not it's time to toss it!

Recipe FAQ's

How to store chocolate cherry muffins?

These are best eaten the same day. Since the muffins are so moist, they will mold quickly when left at room temperature. Store in an airtight container in the fridge for 2 to 3 days.

Can you use frozen cherries?

Yes, but I don't recommend it. Fresh cherries have a better flavor and won't release as much water into the muffins as they cook.

Tips for Success!

For best results I always recommend using weight measurements (especially when baking) because it's the most accurate. Kitchen scales are super affordable and also reduce the number of dishes you have to do! However, all my recipes also include US customary measurements for convince. Use this chart to convert measurements for common ingredients!

Substitutions: In all my recipes, I've included substitutions that I know will work, but I cannot guarantee results if you substitute ingredients that I have not recommended. [For example, granulated sugar and honey are indeed both sweeteners but they have very different properties so they can not always be swapped 1:1. Using honey in a cookie recipe that calls for granulated sugar will yield a giant mess.] In the recipe card you'll find links to the specific ingredients/brands that I use.

A note on salt: I almost exclusively use Diamond Crystal Kosher Salt because it's the best all-purpose salt for cooking and baking. If you're not using kosher salt, consult this handy guide for a conversion chart! When in doubt, if you're using table salt just reduce the amount by half for baked goods. When cooking, I prefer to under-salt because you can always add more! If you've over-salted, adding a little bit of acid (like lemon juice) can help.

More Recipes You Might Like

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    Chocolate Cherry Macarons
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    Black Forest Cupcakes
  • slice of homemade fresh cherry pie with scoop of vanilla ice cream.
    Cherry Pie
  • strawberry lemon muffins with fresh strawberries
    Strawberry Lemon Muffins

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Recipe Card

close up shot of chocolate cherry muffins

Chocolate Cherry Muffins

5 from 57 votes
There is no better pairing than chocolate and cherries and they both go perfectly in muffins!
Prep Time: 10 minutes minutes
Cook Time: 25 minutes minutes
Total Time: 35 minutes minutes
Servings: 12 muffins
Author: Kyleigh Sage
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Special Equipment

  • muffin pan
  • muffin liners
Need Metric Measurements?Use the options below to toggle between cups and grams!

Ingredients
 
 

  • ½ cup unsalted butter, melted
  • ¾ cup granulated sugar
  • 2 large eggs, room temperature
  • 1 teaspoon vanilla extract
  • ½ teaspoon almond extract
  • 2 cups all purpose flour
  • 2 teaspoons baking powder
  • ½ teaspoon kosher salt
  • ½ cup whole milk
  • ½ cup dark chocolate chips
  • 1 cup fresh cherries, pitted and halved

Instructions

  • Preheat your oven to 375°F and prepare you muffin tin.
  • In a large mixing bowl, whisk together the melted butter and sugar.
  • Add in the eggs, vanilla, and almond extract and whisk until combined and smooth.
  • In a separate small bowl, sift together the flour, baking powder, and salt.
  • Add half of the dry ingredient mixture and stir until combined.
  • Mix in the milk. Then stir in the remaining dry ingredients.
  • Gently stir in the cherries and chocolate chips.
  • Spoon the batter into your muffin cups so that they are about ⅔ full.
  • Bake at 375°F for 20-25 minutes for regular sized muffins. Rotate the pan about halfway through so that the muffins brown evenly.

Notes

For mini muffins reduce the baking time to 15 minutes.
Muffins will keep at room temperature in an airtight container in the fridge for up to 3 days.

Nutrition

Serving: 1 | Calories: 244kcal | Carbohydrates: 33.6g | Protein: 4g | Fat: 10.8g | Saturated Fat: 6.6g | Cholesterol: 50mg | Sodium: 179mg | Fiber: 0.8g | Sugar: 16.8g

The nutritional information on this website is only an estimate and is provided for convenience and as a courtesy only. The accuracy of the nutritional information for any recipe on this site is not guaranteed.

Category | Breakfast, Snack
Cuisine | American
Love this recipe?Mention @barleyandsage on Instagram and tag #barleyandsage
« Dark Chocolate Raspberry Cookies
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Comments

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    Recipe Rating




    5 from 57 votes (55 ratings without comment)
  1. Wendy Tylor-Smith says

    January 24, 2026 at 6:40 pm

    I made these using g/f SR flour. The quantities were great and the time was right for my oven. some cocoa would have added to the color. Very nice.

    Reply
  2. SL says

    July 17, 2024 at 5:50 pm

    5 stars
    I made these, sub olive oil for butter and threw together some streusel for the top- soooo yummy. Will definitely make again

    Reply
  3. Jennifer says

    March 09, 2024 at 4:16 pm

    Thank you so much for the recipe to try. You mentioned you include substitution possibilities. I want to sub the eggs. Typically, I can use a flex egg or applesauce. Any recommendations? Thank you again!!!!

    Reply
    • Kyleigh Sage says

      March 10, 2024 at 3:24 pm

      I haven't tested this specific recipe with either, but in my experience flax eggs usually work well so that's what I would go with!

      Reply
  4. Mindy Bostick says

    August 19, 2023 at 2:05 pm

    5 stars
    I love this recipe so much! With the abundance of beautiful ripe cherries this year, I've made several batches for friends and family, which have all be devoted. Two questions -can these be frozen so we can enjoy them later now that cherry season is ending and do you have any other flavor combinations you would suggest? I would love to use this excellent muffin base with other fruits or nuts and chocolate! Thank you.

    Reply
    • Kyleigh Sage says

      August 19, 2023 at 2:46 pm

      I’m so glad!! They should freeze well, I’d recommend letting them then thaw in the fridge overnight and reheating in the oven.
      Honestly any fruit/nut combo should work great — I’d just stick to similar ratios

      Reply
Kyleigh looking at cupcakes.

Hi, I'm Kyleigh!

It's a one woman show around here; I'm the writer, photographer, and recipe developer for Barley & Sage! Here you'll find delicious scratch-made recipes ranging from quick and easy meals to extravagant desserts and everything in between!

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